* refactor(tuning): prune dormant runtime knobs Remove unused tuning controls and adaptive search budget state. Extract testable ONNX slot reconciliation and search telemetry hydration seams, and correct the Apple Silicon sysctl value width. * refactor(vector): retire dormant backends Remove unused FAISS, model-infrastructure, VectorIndexManager, and TurboQuant paths while keeping Simeon PQ and float-vector storage. Migrate unused V2.2 quantized schemas transactionally to V2.3. Databases containing non-default quantized formats or packed-code blobs fail closed with recovery guidance and no mutation. * refactor(plugins): remove legacy SDK tooling Remove the Ghidra and SDK submodules, their bespoke tests, and stale scan exclusions. Retain generic PluginProcess coverage against the repository mock fixture. * build(vector): remove stale FAISS overrides * refactor(ipc): remove dormant FSM snapshots * refactor(ingest): unify bounded KG enqueue * fix(plugins): harden allocation contracts Keep ABI outputs null or fully initialized when allocations fail, and represent empty object payloads without relying on malloc(0). * fix(storage): define empty object reads Return a null buffer with zero length for successful empty-object reads instead of treating malloc(0) as an allocation contract. * refactor(storage): trim through string views * test: prune dormant harness helpers Remove unused readiness and fixture helpers, and keep benchmark client-count doubling in a wide integer domain. * chore(cpp): initialize analyzer-facing locals * build(simeon): advance analyzer cleanup * refactor(config): drop dead daemon client keys * refactor(ipc): inject daemon client transport Socket and in-process execution now share DaemonClient request dispatch, so CLI fallbacks do not need alternate service paths. * refactor(retrieval): route CLI through daemon Search and grep now use the same daemon handlers over socket or in-process transport. Live grep remains an explicit freshness inspection. * refactor(graph): move CLI scope into daemon Graph CLI requests now share daemon handlers across socket and in-process transports. CWD filtering occurs before pagination so scoped totals and pages stay correct. * build: isolate test-only runtime controls * refactor(metadata): decouple lock telemetry * fix(services): return on request timeout * fix(retrieval): enforce workspace scope * fix(graph): scope nodes before pagination * fix(grep): drop binary result lines * fix(daemon): bound checkpoint wait * fix(repair): use KG health checks * fix(storage): always verify compressed CRC * perf(vector): skip unchanged PQ snapshots * build(zyp): exclude bench from default build * build: protect Meson files from formatter * refactor: remove unreachable production APIs * refactor(daemon): remove dormant runtime state * fix(vector): harden daemon provider calls Timed-out coroutines must own their client and requests. Provider discovery must also fail instead of returning synthetic embeddings in production. * refactor(storage): remove unusable adapters * fix(cli): unify in-process add requests * fix(tsan): preserve async worker progress * test(cli): isolate daemon-dependent suites * fix(repair): expose queue backoff progress
381 lines
13 KiB
C++
381 lines
13 KiB
C++
#include <cstdio>
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#include <cstdlib>
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#include <cstring>
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#include <memory>
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#include <mutex>
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#include <string>
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#include <vector>
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#include <nlohmann/json.hpp>
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#include <spdlog/sinks/stdout_color_sinks.h>
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#include <spdlog/spdlog.h>
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#include <yams/daemon/resource/OnnxConcurrencyRegistry.h>
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#include <yams/plugins/abi.h>
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#include <yams/plugins/entity_extractor_v2.h>
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#include "gliner_session.h"
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namespace {
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// Global plugin state
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struct GlintPluginContext {
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std::mutex mutex;
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std::unique_ptr<yams::glint::GlinerSession> session;
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yams::glint::GlinerConfig config;
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bool initialized = false;
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std::string last_error;
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// Default entity labels for NL text
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// GLiNER is zero-shot and can extract any entity type. Labels should be lower/title case.
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// See: https://github.com/urchade/GLiNER, https://arxiv.org/html/2504.00676v1
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std::vector<std::string> default_labels = {
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// General entities (standard NER)
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"person", "organization", "location", "date", "time", "event", "money", "percent",
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// Products and technology
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"product", "technology", "software", "hardware", "programming language", "framework",
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// Scientific/biomedical entities (from GLiNER-biomed research)
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"gene", "protein", "disease", "chemical", "drug", "species", "cell type", "method",
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// Abstract concepts
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"concept", "topic", "field of study", "theory", "algorithm"};
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};
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// Use leaky singleton pattern to avoid static destruction order issues
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// The context will be allocated once and never freed - this is intentional
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// to prevent crashes during program exit when other statics may still reference it
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static GlintPluginContext& get_ctx() {
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static GlintPluginContext* ctx = new GlintPluginContext();
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return *ctx;
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}
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void ensure_plugin_logger() {
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try {
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if (spdlog::default_logger()) {
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return;
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}
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auto sink = std::make_shared<spdlog::sinks::stderr_color_sink_mt>();
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auto logger = std::make_shared<spdlog::logger>("yams_glint", sink);
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logger->set_level(spdlog::level::info);
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spdlog::set_default_logger(std::move(logger));
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} catch (const spdlog::spdlog_ex&) {
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if (auto logger = spdlog::get("yams_glint")) {
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spdlog::set_default_logger(std::move(logger));
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}
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} catch (const std::exception& e) {
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std::fprintf(stderr, "[Glint] Failed to initialize plugin logger: %s\n", e.what());
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} catch (...) {
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std::fprintf(stderr, "[Glint] Failed to initialize plugin logger: unknown error\n");
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}
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}
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char* dup_cstr(const std::string& s) {
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char* p = static_cast<char*>(std::malloc(s.size() + 1));
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if (p)
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std::memcpy(p, s.c_str(), s.size() + 1);
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return p;
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}
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void free_result_abi(void*, yams_entity_extraction_result_v2* res);
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// Initialize session lazily
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bool ensure_session() {
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std::lock_guard<std::mutex> lock(get_ctx().mutex);
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if (get_ctx().session && get_ctx().session->is_ready()) {
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return true;
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}
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// Create session with config
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get_ctx().config.entity_labels = get_ctx().default_labels;
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get_ctx().session = std::make_unique<yams::glint::GlinerSession>(get_ctx().config);
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if (!get_ctx().session->initialize()) {
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get_ctx().last_error = std::string(get_ctx().session->last_error());
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std::fprintf(stderr, "[Glint] Failed to initialize session: %s\n",
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get_ctx().last_error.c_str());
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return false;
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}
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get_ctx().initialized = true;
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std::fprintf(stderr, "[Glint] Session initialized successfully\n");
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return true;
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}
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bool supports_abi(void*, const char* content_type) {
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if (!content_type)
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return false;
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std::string ct(content_type);
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return ct == "text/plain" || ct == "text/markdown" || ct == "application/json";
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}
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int extract_abi(void*, const char* content, size_t content_len,
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const yams_entity_extraction_options_v2* options,
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yams_entity_extraction_result_v2** out) {
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if (!out)
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return YAMS_PLUGIN_ERR_INVALID;
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*out = nullptr;
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auto* r = static_cast<yams_entity_extraction_result_v2*>(
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std::calloc(1, sizeof(yams_entity_extraction_result_v2)));
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if (!r)
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return YAMS_PLUGIN_ERR_INVALID;
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r->entities = nullptr;
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r->entity_count = 0;
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r->relations = nullptr;
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r->relation_count = 0;
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r->error = nullptr;
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// Check for empty input
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if (!content || content_len == 0) {
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*out = r;
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return YAMS_PLUGIN_OK;
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}
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// Ensure session is initialized
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if (!ensure_session()) {
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r->error = dup_cstr(get_ctx().last_error);
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if (!r->error) {
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free_result_abi(nullptr, r);
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return YAMS_PLUGIN_ERR_INVALID;
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}
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*out = r;
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return YAMS_PLUGIN_OK; // Return OK but with error message
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}
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// Parse custom entity labels from options if provided
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std::vector<std::string> labels;
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if (options && options->entity_types && options->entity_type_count > 0) {
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labels.reserve(options->entity_type_count);
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for (size_t i = 0; i < options->entity_type_count; ++i) {
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if (options->entity_types[i]) {
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labels.emplace_back(options->entity_types[i]);
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}
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}
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}
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// Extract entities (acquire ONNX slot for fairness with embeddings/reranker)
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std::string_view text(content, content_len);
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std::vector<yams::glint::EntitySpan> spans;
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{
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yams::daemon::OnnxConcurrencyRegistry::SlotGuard slotGuard(
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yams::daemon::OnnxConcurrencyRegistry::instance(), yams::daemon::OnnxLane::Gliner);
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if (!slotGuard.acquired()) {
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r->error = dup_cstr("ONNX slot timeout for GLiNER");
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if (!r->error) {
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free_result_abi(nullptr, r);
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return YAMS_PLUGIN_ERR_INVALID;
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}
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*out = r;
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return YAMS_PLUGIN_OK;
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}
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std::lock_guard<std::mutex> lock(get_ctx().mutex);
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if (labels.empty()) {
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spans = get_ctx().session->extract(text);
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} else {
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spans = get_ctx().session->extract(text, labels);
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}
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}
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// Convert to ABI format
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if (!spans.empty()) {
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r->entities =
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static_cast<yams_entity_v2*>(std::calloc(spans.size(), sizeof(yams_entity_v2)));
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if (!r->entities) {
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std::free(r);
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return YAMS_PLUGIN_ERR_INVALID;
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}
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r->entity_count = spans.size();
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for (size_t i = 0; i < spans.size(); ++i) {
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const auto& span = spans[i];
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r->entities[i].text = dup_cstr(span.text);
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r->entities[i].type = dup_cstr(span.label);
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r->entities[i].start_offset = static_cast<uint32_t>(span.start_char);
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r->entities[i].end_offset = static_cast<uint32_t>(span.end_char);
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r->entities[i].confidence = span.score;
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r->entities[i].qualified_name = nullptr;
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r->entities[i].scope = nullptr;
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// Add properties JSON with word indices
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nlohmann::json props;
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props["start_word"] = span.start_word;
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props["end_word"] = span.end_word;
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r->entities[i].properties_json = dup_cstr(props.dump());
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if (!r->entities[i].text || !r->entities[i].type || !r->entities[i].properties_json) {
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free_result_abi(nullptr, r);
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return YAMS_PLUGIN_ERR_INVALID;
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}
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}
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}
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*out = r;
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return YAMS_PLUGIN_OK;
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}
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void free_result_abi(void*, yams_entity_extraction_result_v2* res) {
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if (!res)
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return;
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if (res->entities) {
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for (size_t i = 0; i < res->entity_count; ++i) {
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std::free(res->entities[i].text);
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std::free(res->entities[i].type);
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std::free(res->entities[i].qualified_name);
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std::free(res->entities[i].scope);
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std::free(res->entities[i].properties_json);
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}
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std::free(res->entities);
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}
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if (res->relations) {
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for (size_t i = 0; i < res->relation_count; ++i) {
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std::free(res->relations[i].src_entity);
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std::free(res->relations[i].dst_entity);
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std::free(res->relations[i].relation_type);
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}
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std::free(res->relations);
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}
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std::free(res->error);
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std::free(res);
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}
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int get_capabilities_json_abi(void*, char** out_json) {
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if (!out_json)
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return YAMS_PLUGIN_ERR_INVALID;
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nlohmann::json caps;
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caps["content_types"] = {"text/plain", "text/markdown", "application/json"};
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caps["entity_types"] = get_ctx().default_labels;
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caps["model"] = "gliner";
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caps["version"] = "0.1.0";
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caps["supports_custom_labels"] = true;
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caps["max_width"] = get_ctx().config.max_width;
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caps["threshold"] = get_ctx().config.threshold;
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*out_json = dup_cstr(caps.dump(2));
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return *out_json ? YAMS_PLUGIN_OK : YAMS_PLUGIN_ERR_INVALID;
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}
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void free_string_abi(void*, char* s) {
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std::free(s);
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}
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} // namespace
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extern "C" {
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YAMS_PLUGIN_API int yams_plugin_get_abi_version(void) {
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return YAMS_PLUGIN_ABI_VERSION;
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}
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YAMS_PLUGIN_API const char* yams_plugin_get_name(void) {
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return "glint";
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}
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YAMS_PLUGIN_API const char* yams_plugin_get_version(void) {
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return "0.1.0";
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}
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YAMS_PLUGIN_API const char* yams_plugin_get_manifest_json(void) {
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return R"({
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"name": "glint",
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"version": "0.1.0",
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"interfaces": [
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{"id": "entity_extractor_v2", "version": 1}
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],
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"description": "Glint - GLiNER-based named entity extraction for natural language text",
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"requires": ["onnx"]
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})";
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}
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YAMS_PLUGIN_API int yams_plugin_init(const char* config_json, const void* host_context) {
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(void)host_context;
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ensure_plugin_logger();
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// Parse configuration
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if (config_json && *config_json) {
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try {
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auto cfg = nlohmann::json::parse(config_json, nullptr, false);
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if (!cfg.is_discarded()) {
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if (cfg.contains("model_path") && cfg["model_path"].is_string()) {
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get_ctx().config.model_path = cfg["model_path"].get<std::string>();
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}
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if (cfg.contains("tokenizer_path") && cfg["tokenizer_path"].is_string()) {
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get_ctx().config.tokenizer_path = cfg["tokenizer_path"].get<std::string>();
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}
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if (cfg.contains("threshold") && cfg["threshold"].is_number()) {
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get_ctx().config.threshold = cfg["threshold"].get<float>();
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}
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if (cfg.contains("max_width") && cfg["max_width"].is_number()) {
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get_ctx().config.max_width = cfg["max_width"].get<size_t>();
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}
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if (cfg.contains("entity_labels") && cfg["entity_labels"].is_array()) {
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get_ctx().default_labels.clear();
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for (const auto& label : cfg["entity_labels"]) {
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if (label.is_string()) {
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get_ctx().default_labels.push_back(label.get<std::string>());
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}
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}
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}
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}
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} catch (const std::exception& e) {
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std::fprintf(stderr, "[Glint] Failed to parse config: %s\n", e.what());
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}
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}
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std::fprintf(stderr, "[Glint] Plugin initialized\n");
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return YAMS_PLUGIN_OK;
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}
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YAMS_PLUGIN_API void yams_plugin_shutdown(void) {
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std::lock_guard<std::mutex> lock(get_ctx().mutex);
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get_ctx().session.reset();
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get_ctx().initialized = false;
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std::fprintf(stderr, "[Glint] Plugin shutdown\n");
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}
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YAMS_PLUGIN_API int yams_plugin_get_interface(const char* iface_id, uint32_t version,
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void** out_iface) {
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if (!iface_id || !out_iface)
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return YAMS_PLUGIN_ERR_INVALID;
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*out_iface = nullptr;
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if (std::strcmp(iface_id, YAMS_IFACE_ENTITY_EXTRACTOR_V2) == 0 &&
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version == YAMS_IFACE_ENTITY_EXTRACTOR_V2_VERSION) {
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static yams_entity_extractor_v2 g_iface = {
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.abi_version = YAMS_IFACE_ENTITY_EXTRACTOR_V2_VERSION,
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.self = nullptr,
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.supports = supports_abi,
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.extract = extract_abi,
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.free_result = free_result_abi,
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.get_capabilities_json = get_capabilities_json_abi,
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.free_string = free_string_abi,
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};
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*out_iface = &g_iface;
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return YAMS_PLUGIN_OK;
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}
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return YAMS_PLUGIN_ERR_NOT_FOUND;
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}
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YAMS_PLUGIN_API int yams_plugin_get_health_json(char** out_json) {
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if (!out_json)
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return YAMS_PLUGIN_ERR_INVALID;
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nlohmann::json health;
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health["status"] = get_ctx().initialized ? "ready" : "not_initialized";
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health["model_path"] = get_ctx().config.model_path;
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health["threshold"] = get_ctx().config.threshold;
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if (get_ctx().session) {
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health["session_ready"] = get_ctx().session->is_ready();
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if (!get_ctx().session->last_error().empty()) {
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health["last_error"] = std::string(get_ctx().session->last_error());
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}
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}
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*out_json = dup_cstr(health.dump(2));
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return *out_json ? YAMS_PLUGIN_OK : YAMS_PLUGIN_ERR_INVALID;
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}
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} // extern "C"
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