On Linux the Glint plugin always built in mock mode: meson found the ONNX
Runtime headers but its find_library('onnxruntime') looked in a libdir
taken from the already-normalized dependency, found nothing, and dropped
YAMS_USE_ONNX_RUNTIME, so GLiNER never ran (the v0.20.3 deb's glint has
no ONNX Runtime dependency either). On macOS it linked Homebrew's copy
directly.
Glint now uses the shared ONNX Runtime loader like the ONNX plugin: it
compiles against the headers only (ORT_API_MANUAL_INIT through
ort_cxx_api_wrapper.h), and before creating the session it resolves a
runtime with the same system-first, bundled-fallback policy. If none is
available the session reports "ONNX Runtime unavailable: ..." and entity
extraction is disabled instead of silently running the mock. Plugin
health gains an onnx_runtime object (available, source, version, path or
error), and [plugins.glint] runtime_library pins a copy.
Verified on grim (Linux, release, staged tree in a clean debian:testing
container): "Glint plugin: ONNX Runtime enabled (loaded at runtime)" at
configure, "[Glint] Loaded ONNX model with 6 inputs, 5 outputs" at run
time, and the daemon's title+NL stage extracts entities ("nl=5" for a
document naming people, companies, a place and a date).
Signed-off-by: trvon <me@trevon.dev>
Plugins and libyams_onnx_resource were linked with default visibility, so
their dynamic symbol tables exported everything they contained, including
statically linked third-party code. The S3 plugin exported 11,147
symbols (OpenSSL, libcurl, zlib, spdlog, nlohmann_json); the ONNX
resource library exported 895 (850 of them spdlog). Every loader uses
RTLD_LOCAL, so this was not a live interposition bug, but the export
table is the ABI and anything that binds RTLD_GLOBAL (or a future host)
could resolve into a plugin's private copies.
Plugins:
- plugins/exports/yams_plugin.map (ELF version script, global
yams_plugin_*, local *) and yams_plugin.exp (ld64
-exported_symbols_list) are applied to every plugin (s3, onnx, glint,
zyp) with gnu_symbol_visibility: 'hidden' and --exclude-libs,ALL.
- The S3 legacy factory (yams_plugin_create/destroy_object_storage) is
marked YAMS_PLUGIN_API so it stays exported under hidden visibility.
libyams_onnx_resource:
- Builds with hidden visibility; YAMS_ONNX_RESOURCE_API now expands to
visibility("default") on GCC/Clang, so only OnnxConcurrencyRegistry is
exported.
- It no longer links spdlog. Its messages reached the host log only
because the executable's spdlog interposed the library's copy; with the
copy hidden, the registry would have logged through a private default
logger to stdout. The registry now takes a host log sink
(OnnxConcurrencyRegistry::setLogSink); TuningManager and
AbiModelProviderAdapter install a spdlog forwarder from the header-only
onnx_registry_spdlog_sink.h. Without a sink, messages are dropped.
Tests (red first on grim, Debug):
- tests/plugins/plugin_export_surface_catch2_test.cpp dlopens the built
S3 and zyp plugins and asserts the entry points resolve while libcurl,
OpenSSL, zlib and zyp internals do not: 2/2 cases failed (11 of 31
assertions) before, pass after.
- resource_governance_test gains a case for the log sink routing (did
not compile before; passes after). `meson test --suite plugins`: 5/5.
Measured on grim (release, stripped staged payload):
file bytes before after exports before after
libyams_object_storage_s3.so 7,854,064 6,240,112 11,147 10
yams_zyp.so 80,112 63,728 103 8
libyams_onnx_resource.so 477,472 30,840 895 20
bin/yams-cli 33,712,056 33,859,512 80 39
bin/yams-daemon 28,389,784 28,537,304 98 39
The executables now carry their own spdlog code paths instead of
exporting them for the resource library to interpose (+0.4%), and export
41 fewer symbols each. check_install_surface turns GREEN; budgets are
reset to the measured payload plus ~20%.
Signed-off-by: trvon <me@trevon.dev>
`meson install` of a Release tree staged 2.4 GiB: all 28 internal static
libraries (1.3 GiB), the whole include/ tree (459 files), 22 pkg-config
files for libraries that were never meant to be linked from outside, and
the ONNX resource library in the system libdir. Packages hid this by
deleting include/, *.a and pkgconfig/ after the fact.
- Internal static libraries are `install: false` and their pkg.generate()
calls are gone, as is the top-level yams.pc (it required yams-api, which
is not installable). Benchmarks are no longer installed either.
- Headers are not installed: no installable C++ library exists to link
them against. The one SDK surface, the mobile C ABI, installs
mobile_bindings.h and its .pc under the 'devel' install tag.
- Runtime installs carry explicit install_tag: 'runtime' where Meson
cannot infer one (data, systemd unit/preset, the yams alias symlink,
Windows DLL copies, the libzpdf install script), so
`meson install --tags runtime` stages the same set as a plain install.
- libyams_onnx_resource moves from <libdir> to the private <libdir>/yams
on Linux/macOS, without a soname version since nothing outside this
build links it. yams-cli/yams-daemon RUNPATH becomes $ORIGIN/../lib/yams
(@executable_path on macOS) and the ONNX/Glint plugins use $ORIGIN/..
so they resolve it and the bundled ONNX Runtime, which also moves to
<libdir>/yams (the ONNX plugin's runtime loader already searches its
parent directory). Windows keeps its existing DLL layout.
- Homebrew templates and the macOS install smoke follow the new layout.
- scripts/prune-runtime-install.sh only strips now.
Measured on grim (Linux x86_64 Release, prefix /usr/local):
staged paths 522 -> 11, staged bytes 2.4 GiB -> 1.0 GiB (unstripped)
check_install_surface path violations: 6 -> 0
`--tags devel` stages nothing; ldd resolves libyams_onnx_resource from
bin/../lib/yams and the staged `yams --version` runs.
Signed-off-by: trvon <me@trevon.dev>
* build: standardize the Debug build dir on build/debug
`docs/BUILD.md` and `AGENTS.md` document `./setup.sh Debug` producing
`build/debug`, but `setup.sh`/`setup.ps1` created `builddir` and `.clangd`
pointed there too, so the documented layout and the actual tree disagreed.
Align the Debug mapping with the documented layout:
- setup.sh / setup.ps1: Debug -> `build/debug`
- CMakeLists.txt: Debug `_meson_build_dir` -> `build/debug`
- .clangd: CompilationDatabase -> `build/debug`
- plugin test fallbacks, S3 smoke default, quality-gate candidate list, and
doc examples -> `build/debug`
Legacy `builddir` trees stay readable: the quality gate and local-ci scripts
still probe `builddir` as a fallback, and `plugin_trust` already treats
`/build/` paths as build artifacts.
* build: migrate remaining Debug consumers off builddir
Follow-up to the Debug build-dir standardization: tracked consumers still
hardcoded `builddir` and would break or silently skip against a fresh
`build/debug` tree. Migrate them, keeping tolerant fallbacks where a legacy
tree may still exist.
- CI: `.github/workflows/tests.yml` runs `./setup.sh Debug` and then compiled
`-C builddir`; switch BUILD_DIR/COMPILE_DB_DIR/compile paths to `build/debug`.
Same for windows-test-diagnose.yml.
- IDE: `.vscode/tasks.json` build/test/bench tasks target `build/debug`.
- Runtime: `object_storage_plugin_loader` also probes `build/debug/plugins`
(and the flat `build/debug`), retaining the `builddir` fallbacks.
- Tests/docs: ONNX tuning integration plugin dir, benchmarks, and plugin
READMEs/examples use `build/debug`.
`./build/*` is already excluded from the quality-gate find and `.dockerignore`,
so no exclusion lists change.
* chore: remove dead post-ingest helper
Remove shouldPrepareSequentially, the sole Fold unused-function finding
confirmed dead by clean ASan and TSan builds. All other 45 findings have
live callers or uses that Fold's bounded model missed and remain intact.
Fold provenance: build/fold/release-prep-79.sarif (2026-09-01 run).
Signed-off-by: trvon <me@trevon.dev>
* chore(plugins): document Fold ownership
Document 6 proved memory-leak findings as intentional ownership:
process-lifetime Ort::Env singletons and host-freed C-ABI result data.
Refresh portability allowlist anchors shifted by the comments.
Fold provenance: build/fold/release-prep-79.sarif (2026-09-01 run).
Signed-off-by: trvon <me@trevon.dev>
* fix(storage): treat reserve boundary as emergency
Classify available bytes equal to the configured emergency reserve as Emergency, matching the hard-minimum contract and operator message that the reserve has been reached. Add a regression assertion at the exact boundary.
Signed-off-by: trvon <git@trevon.dev>
---------
Signed-off-by: trvon <me@trevon.dev>
Signed-off-by: trvon <git@trevon.dev>
* refactor(tuning): prune dormant runtime knobs
Remove unused tuning controls and adaptive search budget state. Extract testable ONNX slot reconciliation and search telemetry hydration seams, and correct the Apple Silicon sysctl value width.
* refactor(vector): retire dormant backends
Remove unused FAISS, model-infrastructure, VectorIndexManager, and TurboQuant paths while keeping Simeon PQ and float-vector storage.
Migrate unused V2.2 quantized schemas transactionally to V2.3. Databases containing non-default quantized formats or packed-code blobs fail closed with recovery guidance and no mutation.
* refactor(plugins): remove legacy SDK tooling
Remove the Ghidra and SDK submodules, their bespoke tests, and stale scan exclusions. Retain generic PluginProcess coverage against the repository mock fixture.
* build(vector): remove stale FAISS overrides
* refactor(ipc): remove dormant FSM snapshots
* refactor(ingest): unify bounded KG enqueue
* fix(plugins): harden allocation contracts
Keep ABI outputs null or fully initialized when allocations fail, and represent empty object payloads without relying on malloc(0).
* fix(storage): define empty object reads
Return a null buffer with zero length for successful empty-object reads instead of treating malloc(0) as an allocation contract.
* refactor(storage): trim through string views
* test: prune dormant harness helpers
Remove unused readiness and fixture helpers, and keep benchmark client-count doubling in a wide integer domain.
* chore(cpp): initialize analyzer-facing locals
* build(simeon): advance analyzer cleanup
* refactor(config): drop dead daemon client keys
* refactor(ipc): inject daemon client transport
Socket and in-process execution now share DaemonClient request dispatch, so CLI fallbacks do not need alternate service paths.
* refactor(retrieval): route CLI through daemon
Search and grep now use the same daemon handlers over socket or in-process transport. Live grep remains an explicit freshness inspection.
* refactor(graph): move CLI scope into daemon
Graph CLI requests now share daemon handlers across socket and in-process transports. CWD filtering occurs before pagination so scoped totals and pages stay correct.
* build: isolate test-only runtime controls
* refactor(metadata): decouple lock telemetry
* fix(services): return on request timeout
* fix(retrieval): enforce workspace scope
* fix(graph): scope nodes before pagination
* fix(grep): drop binary result lines
* fix(daemon): bound checkpoint wait
* fix(repair): use KG health checks
* fix(storage): always verify compressed CRC
* perf(vector): skip unchanged PQ snapshots
* build(zyp): exclude bench from default build
* build: protect Meson files from formatter
* refactor: remove unreachable production APIs
* refactor(daemon): remove dormant runtime state
* fix(vector): harden daemon provider calls
Timed-out coroutines must own their client and requests. Provider discovery must also fail instead of returning synthetic embeddings in production.
* refactor(storage): remove unusable adapters
* fix(cli): unify in-process add requests
* fix(tsan): preserve async worker progress
* test(cli): isolate daemon-dependent suites
* fix(repair): expose queue backoff progress
